STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060SZ68Uncharacterized protein. (275 aa)    
Predicted Functional Partners:
A0A060SS16
Uncharacterized protein.
   
 
 0.863
A0A060SCW7
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.849
A0A060SFS2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.845
A0A060SSA6
Uncharacterized protein.
   
 
 0.842
A0A060SMB7
Uncharacterized protein.
   
   0.806
A0A060SF73
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
   
 
 0.803
A0A060SGZ8
Uncharacterized protein.
   
   0.778
A0A060SPE3
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.771
A0A060S9H6
Uncharacterized protein.
   
   0.770
A0A060S7R3
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 
 0.768
Your Current Organism:
Trametes cinnabarina
NCBI taxonomy Id: 5643
Other names: Pycnoporus cinnabarinus, T. cinnabarina, Trametes cinnabarina (Jacq. : Fr.) Fr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.