Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBV49764.1 | SBV50275.1 | XBLMG947_0538 | XBLMG947_1053 | TonB-dependent outer membrane receptor. | Transmembrane sensor. | 0.807 |
SBV49764.1 | SBV51119.1 | XBLMG947_0538 | XBLMG947_1903 | TonB-dependent outer membrane receptor. | Outer membrane hemin receptor. | 0.644 |
SBV49764.1 | SBV53175.1 | XBLMG947_0538 | XBLMG947_3985 | TonB-dependent outer membrane receptor. | Ferrichrome-iron receptor 3. | 0.712 |
SBV49918.1 | SBV50275.1 | XBLMG947_0692 | XBLMG947_1053 | TonB-dependent outer membrane receptor. | Transmembrane sensor. | 0.715 |
SBV50274.1 | SBV50275.1 | XBLMG947_1052 | XBLMG947_1053 | Hypothetical protein. | Transmembrane sensor. | 0.725 |
SBV50274.1 | SBV50276.1 | XBLMG947_1052 | XBLMG947_1054 | Hypothetical protein. | ECF subfamily RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.492 |
SBV50274.1 | SBV51119.1 | XBLMG947_1052 | XBLMG947_1903 | Hypothetical protein. | Outer membrane hemin receptor. | 0.591 |
SBV50274.1 | SBV51427.1 | XBLMG947_1052 | XBLMG947_2216 | Hypothetical protein. | Ferrichrome-iron receptor 3. | 0.532 |
SBV50275.1 | SBV49764.1 | XBLMG947_1053 | XBLMG947_0538 | Transmembrane sensor. | TonB-dependent outer membrane receptor. | 0.807 |
SBV50275.1 | SBV49918.1 | XBLMG947_1053 | XBLMG947_0692 | Transmembrane sensor. | TonB-dependent outer membrane receptor. | 0.715 |
SBV50275.1 | SBV50274.1 | XBLMG947_1053 | XBLMG947_1052 | Transmembrane sensor. | Hypothetical protein. | 0.725 |
SBV50275.1 | SBV50276.1 | XBLMG947_1053 | XBLMG947_1054 | Transmembrane sensor. | ECF subfamily RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.945 |
SBV50275.1 | SBV51119.1 | XBLMG947_1053 | XBLMG947_1903 | Transmembrane sensor. | Outer membrane hemin receptor. | 0.681 |
SBV50275.1 | SBV51427.1 | XBLMG947_1053 | XBLMG947_2216 | Transmembrane sensor. | Ferrichrome-iron receptor 3. | 0.657 |
SBV50275.1 | SBV52141.1 | XBLMG947_1053 | XBLMG947_2933 | Transmembrane sensor. | Ferripyoverdine receptor. | 0.643 |
SBV50275.1 | SBV52145.1 | XBLMG947_1053 | XBLMG947_2938 | Transmembrane sensor. | Rhamnogalacturonan acetylesterase. | 0.644 |
SBV50275.1 | SBV53175.1 | XBLMG947_1053 | XBLMG947_3985 | Transmembrane sensor. | Ferrichrome-iron receptor 3. | 0.775 |
SBV50275.1 | SBV53176.1 | XBLMG947_1053 | XBLMG947_3986 | Transmembrane sensor. | Putative membrane protein. | 0.643 |
SBV50276.1 | SBV50274.1 | XBLMG947_1054 | XBLMG947_1052 | ECF subfamily RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.492 |
SBV50276.1 | SBV50275.1 | XBLMG947_1054 | XBLMG947_1053 | ECF subfamily RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Transmembrane sensor. | 0.945 |
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