STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV50600.1Glucose dehydrogenase. (811 aa)    
Predicted Functional Partners:
SBV49432.1
Gluconolactonase.
  
  
 0.949
SBV50460.1
Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.948
SBV52353.1
Gluconolactonase.
  
  
 0.942
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.903
pdhA
Pyruvate dehydrogenase E1 alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
     
 0.891
SBV52548.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.891
SBV52554.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.889
glk
Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.887
SBV51201.1
Pyruvate dehydrogenase E1 beta subunit.
     
 0.885
SBV49260.1
Phosphoglucomutase.
     
 0.883
Your Current Organism:
Xanthomonas bromi
NCBI taxonomy Id: 56449
Other names: ICMP 12545, LMG 947, LMG:947, X. bromi
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