STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV50725.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
SBV50724.1
Prolyl oligopeptidase.
       0.489
SBV50726.1
Hypothetical protein.
       0.477
SBV51648.1
Repressor.
  
     0.441
SBV50727.1
Esterase.
     
 0.436
SBV50795.1
Glycerophosphodiester phosphodiesterase.
  
     0.434
SBV52636.1
Dicarboxylate carrier protein.
  
     0.430
SBV50054.1
P-protein.
   
 
 0.421
Your Current Organism:
Xanthomonas bromi
NCBI taxonomy Id: 56449
Other names: ICMP 12545, LMG 947, LMG:947, X. bromi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.