Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBV49539.1 | SBV51092.1 | XBLMG947_0311 | XBLMG947_1876 | Amidase. | Beta-lactamase. | 0.465 |
SBV49539.1 | guaA | XBLMG947_0311 | XBLMG947_2967 | Amidase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.867 |
SBV49902.1 | SBV51092.1 | XBLMG947_0676 | XBLMG947_1876 | Penicillin-binding protein 1A. | Beta-lactamase. | 0.471 |
SBV49902.1 | ftsI | XBLMG947_0676 | XBLMG947_0105 | Penicillin-binding protein 1A. | Penicillin-binding protein 3; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.889 |
SBV49902.1 | mrdB | XBLMG947_0676 | XBLMG947_0454 | Penicillin-binding protein 1A. | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.857 |
SBV49902.1 | mtgA | XBLMG947_0676 | XBLMG947_1218 | Penicillin-binding protein 1A. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.777 |
SBV51091.1 | SBV51092.1 | XBLMG947_1875 | XBLMG947_1876 | Cation:proton antiporter. | Beta-lactamase. | 0.447 |
SBV51091.1 | SBV51093.1 | XBLMG947_1875 | XBLMG947_1877 | Cation:proton antiporter. | Ribonuclease activity regulator protein RraA; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | 0.448 |
SBV51092.1 | SBV49539.1 | XBLMG947_1876 | XBLMG947_0311 | Beta-lactamase. | Amidase. | 0.465 |
SBV51092.1 | SBV49902.1 | XBLMG947_1876 | XBLMG947_0676 | Beta-lactamase. | Penicillin-binding protein 1A. | 0.471 |
SBV51092.1 | SBV51091.1 | XBLMG947_1876 | XBLMG947_1875 | Beta-lactamase. | Cation:proton antiporter. | 0.447 |
SBV51092.1 | SBV51093.1 | XBLMG947_1876 | XBLMG947_1877 | Beta-lactamase. | Ribonuclease activity regulator protein RraA; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | 0.774 |
SBV51092.1 | SBV51753.1 | XBLMG947_1876 | XBLMG947_2543 | Beta-lactamase. | Beta-glucosidase. | 0.463 |
SBV51092.1 | anmK | XBLMG947_1876 | XBLMG947_3963 | Beta-lactamase. | anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | 0.446 |
SBV51092.1 | ftsI | XBLMG947_1876 | XBLMG947_0105 | Beta-lactamase. | Penicillin-binding protein 3; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.480 |
SBV51092.1 | guaA | XBLMG947_1876 | XBLMG947_2967 | Beta-lactamase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.583 |
SBV51092.1 | mrdB | XBLMG947_1876 | XBLMG947_0454 | Beta-lactamase. | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.465 |
SBV51092.1 | mtgA | XBLMG947_1876 | XBLMG947_1218 | Beta-lactamase. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.466 |
SBV51093.1 | SBV51091.1 | XBLMG947_1877 | XBLMG947_1875 | Ribonuclease activity regulator protein RraA; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | Cation:proton antiporter. | 0.448 |
SBV51093.1 | SBV51092.1 | XBLMG947_1877 | XBLMG947_1876 | Ribonuclease activity regulator protein RraA; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | Beta-lactamase. | 0.774 |
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