STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV51555.1Hypothetical protein. (351 aa)    
Predicted Functional Partners:
SBV51554.1
Lipopolysaccharide core biosynthesis glycosyl transferase.
 
 0.895
SBV52936.1
Hypothetical protein.
  
     0.687
SBV50981.1
Flagellar hook-associated protein FlgL.
  
  
 0.680
SBV50980.1
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
    0.674
SBV50639.1
GumM protein; Belongs to the glycosyltransferase 26 family.
  
 0.671
SBV52551.1
Hypothetical protein.
  
     0.573
SBV51803.1
Hypothetical protein.
  
     0.555
SBV51552.1
Hypothetical protein.
 
     0.548
SBV51313.1
Ribonuclease.
  
     0.547
SBV52101.1
Hypothetical protein.
  
     0.541
Your Current Organism:
Xanthomonas bromi
NCBI taxonomy Id: 56449
Other names: ICMP 12545, LMG 947, LMG:947, X. bromi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.