STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV51781.1Pili assembly chaperone. (237 aa)    
Predicted Functional Partners:
SBV51778.1
Outer membrane usher protein FasD.
 
 
 0.993
SBV51779.1
Hypothetical protein.
 
 
 
 0.970
SBV51776.1
Protein U.
 
 
 
 0.966
SBV51780.1
Hypothetical protein.
       0.785
SBV52722.1
Outer membrane hemolysin activator protein.
  
  
 0.684
SBV51777.1
Pili assembly chaperone.
 
    
0.664
SBV53195.1
Outer membrane hemolysin activator protein.
   
  
 0.620
SBV50292.1
Ketosynthase.
  
     0.558
SBV49770.1
Hypothetical protein.
  
  
 0.555
SBV50907.1
Serine protease.
  
    0.546
Your Current Organism:
Xanthomonas bromi
NCBI taxonomy Id: 56449
Other names: ICMP 12545, LMG 947, LMG:947, X. bromi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.