STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV51841.1GTN reductase. (372 aa)    
Predicted Functional Partners:
SBV50837.1
Glutamate synthase subunit alpha.
    
 0.872
SBV49254.1
Electron transfer flavoprotein subunit beta.
  
 
 0.784
SBV50941.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.715
SBV51886.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.715
SBV49253.1
Electron transfer flavoprotein alpha subunit.
   
 
 0.665
SBV50418.1
Oxidoreductase.
    
 0.646
SBV52584.1
Vanillate O-demethylase.
    
 0.646
SBV51736.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.600
SBV51840.1
MFS transporter.
     
 0.527
SBV50237.1
acetate-CoA ligase.
  
 
 0.493
Your Current Organism:
Xanthomonas bromi
NCBI taxonomy Id: 56449
Other names: ICMP 12545, LMG 947, LMG:947, X. bromi
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