STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV52047.1Ferrous iron transport protein. (96 aa)    
Predicted Functional Partners:
SBV52048.1
Ferrous iron transport protein B.
 
  
 0.997
SBV52049.1
Hypothetical protein.
       0.839
SBV52046.1
enoyl-CoA hydratase.
       0.626
SBV52050.1
Hypothetical protein.
       0.595
SBV52045.1
hydroxymethylglutaryl-CoA lyase.
  
    0.583
nfuA
Hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
     
 0.479
SBV52842.1
Oligopeptide transporter.
  
     0.473
SBV51729.1
Peptidoglycan-associated outer membrane lipoprotein.
  
     0.469
SBV52051.1
Hypothetical protein.
       0.431
SBV49761.1
Hypothetical protein.
  
     0.422
Your Current Organism:
Xanthomonas bromi
NCBI taxonomy Id: 56449
Other names: ICMP 12545, LMG 947, LMG:947, X. bromi
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