Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBV50350.1 | SBV50918.1 | XBLMG947_1128 | XBLMG947_1701 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III C-methyltransferase. | 0.880 |
SBV50350.1 | SBV50925.1 | XBLMG947_1128 | XBLMG947_1708 | Porphobilinogen synthase; Belongs to the ALAD family. | Siroheme synthase. | 0.935 |
SBV50350.1 | SBV52100.1 | XBLMG947_1128 | XBLMG947_2892 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.947 |
SBV50350.1 | SBV52543.1 | XBLMG947_1128 | XBLMG947_3339 | Porphobilinogen synthase; Belongs to the ALAD family. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.963 |
SBV50350.1 | hemA | XBLMG947_1128 | XBLMG947_0259 | Porphobilinogen synthase; Belongs to the ALAD family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.869 |
SBV50350.1 | hemC | XBLMG947_1128 | XBLMG947_1472 | Porphobilinogen synthase; Belongs to the ALAD family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.998 |
SBV50350.1 | hemE | XBLMG947_1128 | XBLMG947_3727 | Porphobilinogen synthase; Belongs to the ALAD family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.739 |
SBV50918.1 | SBV50350.1 | XBLMG947_1701 | XBLMG947_1128 | uroporphyrinogen-III C-methyltransferase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.880 |
SBV50918.1 | SBV50925.1 | XBLMG947_1701 | XBLMG947_1708 | uroporphyrinogen-III C-methyltransferase. | Siroheme synthase. | 0.981 |
SBV50918.1 | SBV52100.1 | XBLMG947_1701 | XBLMG947_2892 | uroporphyrinogen-III C-methyltransferase. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.882 |
SBV50918.1 | SBV52101.1 | XBLMG947_1701 | XBLMG947_2893 | uroporphyrinogen-III C-methyltransferase. | Hypothetical protein. | 0.861 |
SBV50918.1 | SBV52543.1 | XBLMG947_1701 | XBLMG947_3339 | uroporphyrinogen-III C-methyltransferase. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.934 |
SBV50918.1 | hemA | XBLMG947_1701 | XBLMG947_0259 | uroporphyrinogen-III C-methyltransferase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.779 |
SBV50918.1 | hemC | XBLMG947_1701 | XBLMG947_1472 | uroporphyrinogen-III C-methyltransferase. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.991 |
SBV50918.1 | hemE | XBLMG947_1701 | XBLMG947_3727 | uroporphyrinogen-III C-methyltransferase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.880 |
SBV50925.1 | SBV50350.1 | XBLMG947_1708 | XBLMG947_1128 | Siroheme synthase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.935 |
SBV50925.1 | SBV50918.1 | XBLMG947_1708 | XBLMG947_1701 | Siroheme synthase. | uroporphyrinogen-III C-methyltransferase. | 0.981 |
SBV50925.1 | SBV52100.1 | XBLMG947_1708 | XBLMG947_2892 | Siroheme synthase. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.859 |
SBV50925.1 | SBV52101.1 | XBLMG947_1708 | XBLMG947_2893 | Siroheme synthase. | Hypothetical protein. | 0.929 |
SBV50925.1 | SBV52543.1 | XBLMG947_1708 | XBLMG947_3339 | Siroheme synthase. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.995 |
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