Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBV50123.1 | SBV51607.1 | XBLMG947_0899 | XBLMG947_2396 | Phosphate regulon transcriptional regulator; Plays a role in the regulation of phosphate uptake. | Hypothetical protein. | 0.746 |
SBV50123.1 | kduI | XBLMG947_0899 | XBLMG947_2941 | Phosphate regulon transcriptional regulator; Plays a role in the regulation of phosphate uptake. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.617 |
SBV50123.1 | minE | XBLMG947_0899 | XBLMG947_2783 | Phosphate regulon transcriptional regulator; Plays a role in the regulation of phosphate uptake. | Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.571 |
SBV50123.1 | parC | XBLMG947_0899 | XBLMG947_2552 | Phosphate regulon transcriptional regulator; Plays a role in the regulation of phosphate uptake. | DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. | 0.667 |
SBV50894.1 | SBV52147.1 | XBLMG947_1676 | XBLMG947_2940 | 2-keto-3-deoxygluconate kinase. | Short chain dehydrogenase. | 0.964 |
SBV50894.1 | SBV52152.1 | XBLMG947_1676 | XBLMG947_2945 | 2-keto-3-deoxygluconate kinase. | C4-dicarboxylate membrane transport protein. | 0.425 |
SBV50894.1 | SBV52153.1 | XBLMG947_1676 | XBLMG947_2946 | 2-keto-3-deoxygluconate kinase. | C4-dicarboxylate transport system. | 0.489 |
SBV50894.1 | SBV52357.1 | XBLMG947_1676 | XBLMG947_3152 | 2-keto-3-deoxygluconate kinase. | Mannitol 2-dehydrogenase. | 0.610 |
SBV50894.1 | kduI | XBLMG947_1676 | XBLMG947_2941 | 2-keto-3-deoxygluconate kinase. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.757 |
SBV50894.1 | uxaC | XBLMG947_1676 | XBLMG947_3144 | 2-keto-3-deoxygluconate kinase. | Glucuronate isomerase. | 0.692 |
SBV51607.1 | SBV50123.1 | XBLMG947_2396 | XBLMG947_0899 | Hypothetical protein. | Phosphate regulon transcriptional regulator; Plays a role in the regulation of phosphate uptake. | 0.746 |
SBV51607.1 | kduI | XBLMG947_2396 | XBLMG947_2941 | Hypothetical protein. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.812 |
SBV51607.1 | minE | XBLMG947_2396 | XBLMG947_2783 | Hypothetical protein. | Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.831 |
SBV51607.1 | parC | XBLMG947_2396 | XBLMG947_2552 | Hypothetical protein. | DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. | 0.846 |
SBV52147.1 | SBV50894.1 | XBLMG947_2940 | XBLMG947_1676 | Short chain dehydrogenase. | 2-keto-3-deoxygluconate kinase. | 0.964 |
SBV52147.1 | SBV52152.1 | XBLMG947_2940 | XBLMG947_2945 | Short chain dehydrogenase. | C4-dicarboxylate membrane transport protein. | 0.569 |
SBV52147.1 | SBV52153.1 | XBLMG947_2940 | XBLMG947_2946 | Short chain dehydrogenase. | C4-dicarboxylate transport system. | 0.424 |
SBV52147.1 | SBV52357.1 | XBLMG947_2940 | XBLMG947_3152 | Short chain dehydrogenase. | Mannitol 2-dehydrogenase. | 0.566 |
SBV52147.1 | kduI | XBLMG947_2940 | XBLMG947_2941 | Short chain dehydrogenase. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.992 |
SBV52147.1 | uxaC | XBLMG947_2940 | XBLMG947_3144 | Short chain dehydrogenase. | Glucuronate isomerase. | 0.744 |
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