STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV52481.1Hypothetical protein. (52 aa)    
Predicted Functional Partners:
SBV50382.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
  
 0.928
SBV49701.1
Hypothetical protein.
 
  
 0.873
SBV50854.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.740
SBV49663.1
Bacterioferritin.
 
    0.722
SBV52642.1
Hypothetical protein.
  
    0.645
SBV51164.1
Phospholipase A1.
  
    0.630
SBV52482.1
NAD(P)H steroid dehydrogenase.
  
    0.610
SBV50192.1
Hypothetical protein.
   
    0.591
SBV50367.1
Hypothetical protein.
   
    0.433
SBV51111.1
Hypothetical protein.
  
  
 0.408
Your Current Organism:
Xanthomonas bromi
NCBI taxonomy Id: 56449
Other names: ICMP 12545, LMG 947, LMG:947, X. bromi
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.