STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBV52792.1Hypothetical protein. (1343 aa)    
Predicted Functional Partners:
SBV52789.1
Hypothetical protein.
 
   0.990
SBV52790.1
Hypothetical protein.
 
 
   0.952
SBV49981.1
Lipoprotein.
   
   0.844
SBV50826.1
Hypothetical protein.
   
   0.844
SBV52704.1
Hypothetical protein.
 
     0.541
SBV50800.1
Polysaccharide deacetylase.
  
     0.529
SBV51837.1
Hypothetical protein.
  
     0.495
SBV50196.1
Hypothetical protein.
  
     0.487
SBV52252.1
Hypothetical protein.
  
     0.481
SBV50799.1
Polysaccharide deacetylase.
  
     0.459
Your Current Organism:
Xanthomonas bromi
NCBI taxonomy Id: 56449
Other names: ICMP 12545, LMG 947, LMG:947, X. bromi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.