Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBV50054.1 | SBV53218.1 | XBLMG947_0830 | XBLMG947_4028 | P-protein. | Hypothetical protein. | 0.604 |
SBV50054.1 | guaB | XBLMG947_0830 | XBLMG947_2968 | P-protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.654 |
SBV50054.1 | hisB | XBLMG947_0830 | XBLMG947_2814 | P-protein. | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | 0.893 |
SBV50972.1 | SBV53218.1 | XBLMG947_1755 | XBLMG947_4028 | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein. | 0.551 |
SBV51230.1 | SBV52380.1 | XBLMG947_2016 | XBLMG947_3175 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Polysialic acid capsule expression protein. | 0.717 |
SBV51230.1 | SBV53218.1 | XBLMG947_2016 | XBLMG947_4028 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Hypothetical protein. | 0.502 |
SBV51230.1 | atpD | XBLMG947_2016 | XBLMG947_2118 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.435 |
SBV51230.1 | guaB | XBLMG947_2016 | XBLMG947_2968 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.770 |
SBV51230.1 | hisB | XBLMG947_2016 | XBLMG947_2814 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | 0.465 |
SBV52380.1 | SBV51230.1 | XBLMG947_3175 | XBLMG947_2016 | Polysialic acid capsule expression protein. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.717 |
SBV52380.1 | SBV53218.1 | XBLMG947_3175 | XBLMG947_4028 | Polysialic acid capsule expression protein. | Hypothetical protein. | 0.480 |
SBV52380.1 | atpD | XBLMG947_3175 | XBLMG947_2118 | Polysialic acid capsule expression protein. | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.634 |
SBV52380.1 | atpG | XBLMG947_3175 | XBLMG947_2119 | Polysialic acid capsule expression protein. | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.491 |
SBV52380.1 | guaB | XBLMG947_3175 | XBLMG947_2968 | Polysialic acid capsule expression protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.949 |
SBV52380.1 | hisB | XBLMG947_3175 | XBLMG947_2814 | Polysialic acid capsule expression protein. | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | 0.593 |
SBV52474.1 | SBV53218.1 | XBLMG947_3270 | XBLMG947_4028 | Hypothetical protein. | Hypothetical protein. | 0.547 |
SBV53218.1 | SBV50054.1 | XBLMG947_4028 | XBLMG947_0830 | Hypothetical protein. | P-protein. | 0.604 |
SBV53218.1 | SBV50972.1 | XBLMG947_4028 | XBLMG947_1755 | Hypothetical protein. | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.551 |
SBV53218.1 | SBV51230.1 | XBLMG947_4028 | XBLMG947_2016 | Hypothetical protein. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.502 |
SBV53218.1 | SBV52380.1 | XBLMG947_4028 | XBLMG947_3175 | Hypothetical protein. | Polysialic acid capsule expression protein. | 0.480 |
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