STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCCopper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family. (245 aa)    
Predicted Functional Partners:
AJC44486.1
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.912
AJC44515.1
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.745
cyoD
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.582
AJC45191.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.580
pheA
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.556
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.553
AJC45484.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.540
AJC44489.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.539
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
     
 0.492
AJC47710.1
Tagatose-6-phosphate ketose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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