STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC44488.1Exported exo-alpha-sialidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)    
Predicted Functional Partners:
AJC44489.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.861
AJC45484.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.830
AJC46940.1
L-fucose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
AJC45621.1
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.547
AJC45280.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
AJC45853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
AJC47444.1
Calcineurin phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.454
AJC46990.1
Glycosyl hydrolase family 109; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
AJC44563.1
9-O-acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.415
AJC45285.1
Ketoglutarate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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