Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC44514.1Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (899 aa)    
Predicted Functional Partners:
AJC44515.1
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
AJC44513.1
Glycoside hydrolase family 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.918
AJC44517.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.908
AJC44505.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.760
AJC44506.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.660
AJC47032.1
Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.632
AJC44511.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.625
AJC47584.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.612
AJC44516.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.610
AJC44507.1
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.608
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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