STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC44515.1Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (830 aa)    
Predicted Functional Partners:
AJC44514.1
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
    
 0.926
AJC44513.1
Glycoside hydrolase family 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.841
AJC44517.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.820
AJC44489.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.747
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.745
AJC44506.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.737
AJC45484.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.731
AJC44505.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.729
AJC47032.1
Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.727
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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