Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC44516.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
AJC44517.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.842
AJC44515.1
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.681
AJC44513.1
Glycoside hydrolase family 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.668
AJC44518.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.636
AJC45278.1
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
AJC44514.1
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.610
AJC47464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
AJC46180.1
Peptidase S53; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
AJC46903.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
AJC45521.1
Phosphoanhydride phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.454
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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