Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC44533.1GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)    
Predicted Functional Partners:
AJC45034.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.643
AJC46966.1
Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.643
AJC47118.1
MoxJ protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.562
AJC46343.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.555
AJC46763.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.555
AJC44534.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
AJC47251.1
Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.529
gltB
Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.525
AJC44588.1
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the homoserine dehydrogenase family.
      
 0.515
AJC44532.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.481
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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