AJC44578.1 protein (Xanthomonas sacchari) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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co-expression

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[Homology]

Score

AJC44578.1

Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)

Predicted Functional Partners:

AJC47442.1

0.995

AJC44577.1

0.593

AJC46461.1

0.554

ispG

0.543

AJC44580.1

0.543

AJC47215.1

0.526

AJC47088.1

0.484

AJC46090.1

0.467

AJC47087.1

0.466

AJC47214.1

0.464

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC44577.1	AJC44578.1	SB85_01105	SB85_01110	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
AJC44577.1	AJC44580.1	SB85_01105	SB85_01125	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
AJC44577.1	AJC46090.1	SB85_01105	SB85_10210	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
AJC44577.1	AJC46461.1	SB85_01105	SB85_12505	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
AJC44577.1	AJC47087.1	SB85_01105	SB85_16425	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
AJC44577.1	AJC47088.1	SB85_01105	SB85_16430	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AJC44577.1	AJC47442.1	SB85_01105	SB85_01115	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.655
AJC44577.1	ispG	SB85_01105	SB85_01120	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	0.410
AJC44578.1	AJC44577.1	SB85_01110	SB85_01105	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
AJC44578.1	AJC44580.1	SB85_01110	SB85_01125	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.543
AJC44578.1	AJC46090.1	SB85_01110	SB85_10210	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.467
AJC44578.1	AJC46461.1	SB85_01110	SB85_12505	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
AJC44578.1	AJC47087.1	SB85_01110	SB85_16425	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
AJC44578.1	AJC47088.1	SB85_01110	SB85_16430	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.484
AJC44578.1	AJC47214.1	SB85_01110	SB85_17145	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.464
AJC44578.1	AJC47215.1	SB85_01110	SB85_17150	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.526
AJC44578.1	AJC47442.1	SB85_01110	SB85_01115	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AJC44578.1	ispG	SB85_01110	SB85_01120	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.	0.543
AJC44580.1	AJC44577.1	SB85_01125	SB85_01105	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
AJC44580.1	AJC44578.1	SB85_01125	SB85_01110	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.543