STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC44631.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1720 aa)    
Predicted Functional Partners:
AJC44629.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.882
AJC47448.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
AJC47227.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.690
AJC47233.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.678
AJC44632.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.645
AJC47584.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.548
AJC46136.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.548
AJC44633.1
LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.443
AJC47600.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.422
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.