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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC44756.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
AJC44754.1
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
AJC44751.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
AJC44752.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
AJC44749.1
dTDP-6-deoxy-3,4-keto-hexulose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.791
AJC44753.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
       0.783
AJC44750.1
Sugar O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
AJC44755.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AJC47461.1
Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.760
AJC47462.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
AJC44757.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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