AJC44800.1 protein (Xanthomonas sacchari) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

AJC44800.1

Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)

Predicted Functional Partners:

AJC44799.1

0.976

AJC47050.1

0.907

AJC46090.1

0.891

phoR

0.868

AJC46820.1

0.846

AJC47600.1

0.843

AJC47051.1

0.837

AJC46297.1

0.808

AJC45822.1

0.802

AJC45854.1

0.796

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC44799.1	AJC44800.1	SB85_02485	SB85_02490	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AJC44799.1	AJC45822.1	SB85_02485	SB85_08590	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
AJC44799.1	AJC46090.1	SB85_02485	SB85_10210	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
AJC44799.1	AJC46820.1	SB85_02485	SB85_14800	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.475
AJC44799.1	AJC47050.1	SB85_02485	SB85_16220	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJC44799.1	AJC47600.1	SB85_02485	SB85_11095	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
AJC44800.1	AJC44799.1	SB85_02490	SB85_02485	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AJC44800.1	AJC45822.1	SB85_02490	SB85_08590	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
AJC44800.1	AJC45854.1	SB85_02490	SB85_08770	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.796
AJC44800.1	AJC46090.1	SB85_02490	SB85_10210	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.891
AJC44800.1	AJC46297.1	SB85_02490	SB85_11520	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AJC44800.1	AJC46820.1	SB85_02490	SB85_14800	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
AJC44800.1	AJC47050.1	SB85_02490	SB85_16220	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
AJC44800.1	AJC47051.1	SB85_02490	SB85_16225	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
AJC44800.1	AJC47600.1	SB85_02490	SB85_11095	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AJC44800.1	phoR	SB85_02490	SB85_07800	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
AJC45822.1	AJC44799.1	SB85_08590	SB85_02485	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
AJC45822.1	AJC44800.1	SB85_08590	SB85_02490	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
AJC45822.1	AJC45854.1	SB85_08590	SB85_08770	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533
AJC45822.1	AJC46090.1	SB85_08590	SB85_10210	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995