STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC44803.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (372 aa)    
Predicted Functional Partners:
AJC44804.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.968
AJC44805.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.773
AJC44802.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.703
AJC44874.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.698
AJC44994.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.694
AJC44801.1
Outer membrane channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.688
AJC44873.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.672
AJC46980.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.661
AJC46296.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.657
AJC46800.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.657
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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