STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC45096.1Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)    
Predicted Functional Partners:
treS
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.960
AJC47082.1
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.934
AJC47730.1
Amylosucrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.927
AJC45094.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.924
AJC46959.1
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.918
AJC46988.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.916
AJC44508.1
Beta glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.905
AJC44513.1
Glycoside hydrolase family 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
AJC44575.1
1,4-beta-D-glucan glucohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
AJC47483.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.