STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC45114.1Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1073 aa)    
Predicted Functional Partners:
AJC46408.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
AJC46850.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.675
AJC46743.1
Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.639
AJC45113.1
LOG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
AJC46135.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
AJC44539.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
AJC46746.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
AJC47647.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
AJC45625.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
AJC46851.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.