Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
AJC45138.1Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
ybeY
Heat-shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.928
AJC45851.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
 0.689
AJC47503.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.626
AJC45139.1
Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.599
AJC45137.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
AJC47502.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.482
AJC45607.1
Membane protease HflC; HflC and HflK could regulate a protease.
  
    0.459
AJC44544.1
Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.442
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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