Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC45145.1DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. (525 aa)    
Predicted Functional Partners:
AJC45146.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.984
AJC45196.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.913
AJC45144.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.863
AJC45069.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.620
potG
Putrescine transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
     
 0.465
AJC45141.1
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.462
AJC45142.1
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.459
AJC45583.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.413
AJC47233.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.410
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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