Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AJC45275.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (804 aa)    
Predicted Functional Partners:
AJC45276.1
Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.841
AJC45502.1
alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.808
AJC46895.1
Xylan 1,4-beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.758
AJC46893.1
Alpha-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 67 family.
  
     0.741
AJC46896.1
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.731
AJC47129.1
Endopolygalacturonase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 28 family.
  
     0.679
AJC44517.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
AJC47440.1
Alpha-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
 
     0.669
AJC46157.1
Xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.
 
     0.637
AJC45260.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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