recO protein (Xanthomonas sacchari) - STRING interaction network

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recO

DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (281 aa)

Predicted Functional Partners:

recR

0.919

era

0.827

rnc

0.817

AJC45472.1

0.709

rlmD

0.694

polA

0.676

lepB

0.672

bamE

0.656

AJC46350.1

0.628

AJC45126.1

0.606

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC45126.1	bamE	SB85_04515	SB85_03610	Stringent starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.552
AJC45126.1	recO	SB85_04515	SB85_06540	Stringent starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.606
AJC45472.1	era	SB85_06555	SB85_06545	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.857
AJC45472.1	lepB	SB85_06555	SB85_06560	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	0.793
AJC45472.1	recO	SB85_06555	SB85_06540	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.709
AJC45472.1	rlmD	SB85_06555	SB85_06525	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.486
AJC45472.1	rnc	SB85_06555	SB85_06550	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.891
AJC46350.1	recO	SB85_11860	SB85_06540	Fatty acyl CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.628
bamE	AJC45126.1	SB85_03610	SB85_04515	Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	Stringent starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
bamE	recO	SB85_03610	SB85_06540	Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.656
bamE	rlmD	SB85_03610	SB85_06525	Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.403
era	AJC45472.1	SB85_06545	SB85_06555	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
era	lepB	SB85_06545	SB85_06560	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	0.859
era	recO	SB85_06545	SB85_06540	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.827
era	rnc	SB85_06545	SB85_06550	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.915
lepB	AJC45472.1	SB85_06560	SB85_06555	Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
lepB	era	SB85_06560	SB85_06545	Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.859
lepB	recO	SB85_06560	SB85_06540	Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.672
lepB	rnc	SB85_06560	SB85_06550	Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.921
polA	recO	SB85_12225	SB85_06540	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.676