STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC45532.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
AJC45533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
tolQ
Colicin transporter; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.537
AJC46488.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.537
AJC47300.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.537
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.509
tolA
Membrane protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.474
AJC44596.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.474
AJC47469.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.474
AJC45384.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.474
AJC46487.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.474
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.