Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC45553.1Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
AJC47535.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
AJC45552.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.918
AJC45555.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
AJC45554.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.623
AJC45442.1
Endoproteinase ArgC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.558
AJC45957.1
General secretion pathway protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.553
AJC47600.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.546
AJC45369.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alkaline phosphatase family.
   
  
 0.453
AJC45387.1
DnaJ domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
AJC45954.1
General secretion pathway protein GspM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.416
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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