Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC45580.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (672 aa)    
Predicted Functional Partners:
AJC47390.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.680
AJC47525.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.563
AJC44764.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.561
AJC45358.1
Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.559
AJC45038.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.557
ddpX
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
      
 0.517
AJC45578.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
AJC45579.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
AJC46971.1
Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.475
AJC47114.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.471
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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