Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC47537.1Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. (1113 aa)    
Predicted Functional Partners:
AJC45599.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.981
AJC45600.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
AJC45597.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.953
AJC44501.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.912
AJC47653.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.843
AJC47426.1
Specificity determinant HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.701
AJC45598.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.697
AJC47613.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.416
AJC44500.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.406
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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