AJC45617.1 protein (Xanthomonas sacchari) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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textmining

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co-expression

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gene fusions

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[Homology]

Score

AJC45617.1

Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)

Predicted Functional Partners:

AJC45618.1

0.753

AJC47622.1

0.747

AJC45620.1

0.724

AJC45823.1

0.512

AJC45619.1

0.508

AJC47600.1

0.508

AJC44481.1

0.496

pbpC

0.486

AJC46306.1

0.486

AJC46052.1

0.479

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC44481.1	AJC45617.1	SB85_00490	SB85_07340	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
AJC44481.1	AJC46306.1	SB85_00490	SB85_11575	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AJC44481.1	AJC47600.1	SB85_00490	SB85_11095	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
AJC44481.1	AJC47622.1	SB85_00490	SB85_11795	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
AJC45617.1	AJC44481.1	SB85_07340	SB85_00490	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
AJC45617.1	AJC45618.1	SB85_07340	SB85_07350	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
AJC45617.1	AJC45619.1	SB85_07340	SB85_07355	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
AJC45617.1	AJC45620.1	SB85_07340	SB85_07360	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.724
AJC45617.1	AJC45823.1	SB85_07340	SB85_08595	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
AJC45617.1	AJC46052.1	SB85_07340	SB85_09970	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
AJC45617.1	AJC46306.1	SB85_07340	SB85_11575	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
AJC45617.1	AJC47600.1	SB85_07340	SB85_11095	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
AJC45617.1	AJC47622.1	SB85_07340	SB85_11795	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747
AJC45617.1	pbpC	SB85_07340	SB85_07335	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
AJC45618.1	AJC45617.1	SB85_07350	SB85_07340	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
AJC45618.1	AJC45619.1	SB85_07350	SB85_07355	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
AJC45618.1	AJC45620.1	SB85_07350	SB85_07360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.933
AJC45619.1	AJC45617.1	SB85_07355	SB85_07340	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
AJC45619.1	AJC45618.1	SB85_07355	SB85_07350	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
AJC45619.1	AJC45620.1	SB85_07355	SB85_07360	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.872