AJC45698.1 protein (Xanthomonas sacchari) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJC45698.1

Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)

Predicted Functional Partners:

AJC47545.1

0.751

AJC44901.1

0.700

AJC45380.1

0.667

purF

0.616

AJC45697.1

0.604

tolA

0.602

AJC45954.1

0.593

AJC46633.1

0.576

AJC45008.1

0.568

AJC47140.1

0.565

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC44901.1	AJC45008.1	SB85_03105	SB85_03730	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
AJC44901.1	AJC45380.1	SB85_03105	SB85_06050	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
AJC44901.1	AJC45698.1	SB85_03105	SB85_07860	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
AJC44901.1	AJC45954.1	SB85_03105	SB85_09415	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General secretion pathway protein GspM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AJC44901.1	AJC46633.1	SB85_03105	SB85_13640	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
AJC44901.1	AJC47140.1	SB85_03105	SB85_16730	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0250 family.	0.756
AJC44901.1	tolA	SB85_03105	SB85_00325	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AJC45008.1	AJC44901.1	SB85_03730	SB85_03105	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
AJC45008.1	AJC45380.1	SB85_03730	SB85_06050	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565
AJC45008.1	AJC45698.1	SB85_03730	SB85_07860	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
AJC45008.1	tolA	SB85_03730	SB85_00325	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
AJC45380.1	AJC44901.1	SB85_06050	SB85_03105	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
AJC45380.1	AJC45008.1	SB85_06050	SB85_03730	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565
AJC45380.1	AJC45697.1	SB85_06050	SB85_07855	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
AJC45380.1	AJC45698.1	SB85_06050	SB85_07860	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
AJC45380.1	AJC45954.1	SB85_06050	SB85_09415	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General secretion pathway protein GspM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
AJC45380.1	AJC46633.1	SB85_06050	SB85_13640	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
AJC45380.1	AJC47140.1	SB85_06050	SB85_16730	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0250 family.	0.553
AJC45380.1	tolA	SB85_06050	SB85_00325	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
AJC45697.1	AJC45380.1	SB85_07855	SB85_06050	Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474