Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC45700.1Dipeptidyl-peptidase 7; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (719 aa)    
Predicted Functional Partners:
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
       0.572
AJC46746.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
AJC45038.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
AJC45699.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family.
       0.475
AJC45580.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
AJC47524.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
AJC46900.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
AJC44539.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
AJC46053.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.423
AJC46850.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.421
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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