Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC45804.1N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
AJC45803.1
DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
AJC44846.1
Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.709
AJC44907.1
N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.567
AJC46926.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
AJC47089.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.471
AJC45801.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
AJC45802.1
Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
AJC47422.1
Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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