AJC45832.1 protein (Xanthomonas sacchari) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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gene fusions

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[Homology]

Score

AJC45832.1

Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)

Predicted Functional Partners:

AJC45831.1

0.788

AJC45833.1

0.551

AJC45834.1

0.458

AJC45517.1

0.453

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC45517.1	AJC45832.1	SB85_06805	SB85_08645	Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.453
AJC45831.1	AJC45832.1	SB85_08640	SB85_08645	Glucose-fructose oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.788
AJC45832.1	AJC45517.1	SB85_08645	SB85_06805	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.	0.453
AJC45832.1	AJC45831.1	SB85_08645	SB85_08640	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucose-fructose oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.788
AJC45832.1	AJC45833.1	SB85_08645	SB85_08650	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AJC45832.1	AJC45834.1	SB85_08645	SB85_08655	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
AJC45833.1	AJC45832.1	SB85_08650	SB85_08645	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AJC45833.1	AJC45834.1	SB85_08650	SB85_08655	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
AJC45834.1	AJC45832.1	SB85_08655	SB85_08645	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
AJC45834.1	AJC45833.1	SB85_08655	SB85_08650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631