STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC45886.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)    
Predicted Functional Partners:
AJC46495.1
2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
AJC45887.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.610
AJC45885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.498
AJC46461.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.466
AJC44417.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.441
AJC46045.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
AJC44588.1
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
   
 0.431
AJC46042.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.430
AJC46092.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.421
AJC46048.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.406
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.