AJC45886.1 protein (Xanthomonas sacchari) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

AJC45886.1

Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)

Predicted Functional Partners:

AJC45887.1

0.616

AJC46495.1

0.611

AJC45885.1

0.497

AJC44417.1

0.441

AJC46045.1

0.432

AJC46042.1

0.430

AJC46092.1

0.421

AJC46048.1

0.406

AJC46582.1

0.400

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC44417.1	AJC45886.1	SB85_00095	SB85_08970	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.441
AJC44417.1	AJC46045.1	SB85_00095	SB85_09925	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AJC45885.1	AJC45886.1	SB85_08965	SB85_08970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.497
AJC45886.1	AJC44417.1	SB85_08970	SB85_00095	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.441
AJC45886.1	AJC45885.1	SB85_08970	SB85_08965	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.497
AJC45886.1	AJC45887.1	SB85_08970	SB85_08975	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
AJC45886.1	AJC46042.1	SB85_08970	SB85_09905	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.430
AJC45886.1	AJC46045.1	SB85_08970	SB85_09925	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
AJC45886.1	AJC46048.1	SB85_08970	SB85_09945	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
AJC45886.1	AJC46092.1	SB85_08970	SB85_10220	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
AJC45886.1	AJC46495.1	SB85_08970	SB85_12705	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.611
AJC45886.1	AJC46582.1	SB85_08970	SB85_13280	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
AJC45887.1	AJC45886.1	SB85_08975	SB85_08970	Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
AJC46042.1	AJC45886.1	SB85_09905	SB85_08970	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
AJC46042.1	AJC46045.1	SB85_09905	SB85_09925	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
AJC46042.1	AJC46048.1	SB85_09905	SB85_09945	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
AJC46045.1	AJC44417.1	SB85_09925	SB85_00095	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AJC46045.1	AJC45886.1	SB85_09925	SB85_08970	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
AJC46045.1	AJC46042.1	SB85_09925	SB85_09905	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.772
AJC46048.1	AJC45886.1	SB85_09945	SB85_08970	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406