STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC45887.1Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)    
Predicted Functional Partners:
treS
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.945
glgX
Glycogen debranching protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.941
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.928
glgB-2
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.928
AJC47082.1
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.918
treY
Malto-oligosyltrehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.912
AJC45094.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.905
AJC46988.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.905
AJC45096.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
AJC47565.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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