STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJC45944.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (643 aa)    
Predicted Functional Partners:
AJC45943.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.942
AJC45945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.922
AJC45942.1
Glycosidase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.909
AJC45937.1
Cation tolerance protein CutA; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
 
 0.889
AJC45936.1
1,4-D-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.599
AJC47635.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.580
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
       0.568
AJC44663.1
Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.556
AJC46441.1
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.556
AJC45935.1
Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.550
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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