AJC45961.1 protein (Xanthomonas sacchari) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

AJC45961.1

Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (631 aa)

Predicted Functional Partners:

AJC47482.1

0.713

AJC45071.1

0.630

AJC47564.1

0.540

gspE

0.412

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC45071.1	AJC45961.1	SB85_04095	SB85_09460	Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.	0.630
AJC45071.1	AJC47482.1	SB85_04095	SB85_03850	Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.721
AJC45961.1	AJC45071.1	SB85_09460	SB85_04095	Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.	Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
AJC45961.1	AJC47482.1	SB85_09460	SB85_03850	Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.	Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.713
AJC45961.1	AJC47564.1	SB85_09460	SB85_09465	Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AJC45961.1	gspE	SB85_09460	SB85_09455	Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.	General secretion pathway protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.412
AJC47482.1	AJC45071.1	SB85_03850	SB85_04095	Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.721
AJC47482.1	AJC45961.1	SB85_03850	SB85_09460	Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.	0.713
AJC47564.1	AJC45961.1	SB85_09465	SB85_09460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.	0.540
gspE	AJC45961.1	SB85_09455	SB85_09460	General secretion pathway protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.	0.412