AJC45976.1 protein (Xanthomonas sacchari) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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[Homology]

Score

AJC45976.1

Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)

Predicted Functional Partners:

AJC47129.1

0.957

AJC47584.1

0.744

AJC45277.1

0.742

AJC46157.1

0.738

AJC45276.1

0.736

AJC46136.1

0.727

AJC45522.1

0.726

AJC47533.1

0.678

AJC47146.1

0.646

AJC46784.1

0.625

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC45276.1	AJC45277.1	SB85_05415	SB85_05420	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
AJC45276.1	AJC45522.1	SB85_05415	SB85_06830	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.653
AJC45276.1	AJC45976.1	SB85_05415	SB85_09540	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736
AJC45276.1	AJC46136.1	SB85_05415	SB85_10495	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
AJC45276.1	AJC46157.1	SB85_05415	SB85_10620	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	0.749
AJC45276.1	AJC46784.1	SB85_05415	SB85_14600	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	0.493
AJC45276.1	AJC47129.1	SB85_05415	SB85_16665	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Endopolygalacturonase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 28 family.	0.480
AJC45276.1	AJC47146.1	SB85_05415	SB85_16765	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.701
AJC45276.1	AJC47533.1	SB85_05415	SB85_06615	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
AJC45276.1	AJC47584.1	SB85_05415	SB85_10490	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
AJC45277.1	AJC45276.1	SB85_05420	SB85_05415	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.842
AJC45277.1	AJC45976.1	SB85_05420	SB85_09540	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
AJC45277.1	AJC46136.1	SB85_05420	SB85_10495	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
AJC45277.1	AJC46157.1	SB85_05420	SB85_10620	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	0.501
AJC45277.1	AJC46784.1	SB85_05420	SB85_14600	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	0.631
AJC45277.1	AJC47533.1	SB85_05420	SB85_06615	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
AJC45277.1	AJC47584.1	SB85_05420	SB85_10490	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.672
AJC45522.1	AJC45276.1	SB85_06830	SB85_05415	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.653
AJC45522.1	AJC45976.1	SB85_06830	SB85_09540	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
AJC45522.1	AJC46136.1	SB85_06830	SB85_10495	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486