STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC46017.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
AJC47566.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.793
lolA
Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
    
 
 0.714
AJC46350.1
Fatty acyl CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.714
AJC46018.1
Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
AJC45614.1
Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.543
tolA
Membrane protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.446
AJC44596.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.446
AJC47469.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.446
AJC45384.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.446
AJC46487.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.446
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
Server load: high (94%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.