Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
salASalicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)    
Predicted Functional Partners:
AJC46074.1
Salicylate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.722
catA
mRNA 3'-end processing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.690
AJC46075.1
Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
AJC47729.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
AJC47195.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.555
AJC46601.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.524
AJC46602.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.512
AJC47560.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.502
AJC46600.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.465
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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