Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC46076.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)    
Predicted Functional Partners:
AJC47575.1
Benzaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
AJC46701.1
Benzaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.923
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.881
AJC47186.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.656
AJC47576.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.642
benD
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.504
AJC46078.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.485
AJC46079.1
Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.473
AJC46080.1
Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.464
AJC46505.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.417
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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