AJC46112.1 protein (Xanthomonas sacchari) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

AJC46112.1

DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)

Predicted Functional Partners:

AJC46218.1

0.900

AJC46113.1

0.835

AJC46096.1

0.584

AJC45443.1

0.472

AJC46607.1

0.466

tsaB

0.431

AJC46852.1

0.426

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC45443.1	AJC46112.1	SB85_06395	SB85_10330	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
AJC45443.1	AJC46113.1	SB85_06395	SB85_10335	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biotin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
AJC45443.1	AJC46607.1	SB85_06395	SB85_13450	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
AJC46096.1	AJC46112.1	SB85_10240	SB85_10330	Host attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
AJC46096.1	AJC46113.1	SB85_10240	SB85_10335	Host attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biotin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
AJC46112.1	AJC45443.1	SB85_10330	SB85_06395	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
AJC46112.1	AJC46096.1	SB85_10330	SB85_10240	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Host attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
AJC46112.1	AJC46113.1	SB85_10330	SB85_10335	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biotin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
AJC46112.1	AJC46218.1	SB85_10330	SB85_11005	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJC46112.1	AJC46607.1	SB85_10330	SB85_13450	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
AJC46112.1	AJC46852.1	SB85_10330	SB85_15035	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
AJC46112.1	tsaB	SB85_10330	SB85_00460	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycoprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
AJC46113.1	AJC45443.1	SB85_10335	SB85_06395	Biotin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
AJC46113.1	AJC46096.1	SB85_10335	SB85_10240	Biotin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Host attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
AJC46113.1	AJC46112.1	SB85_10335	SB85_10330	Biotin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
AJC46218.1	AJC46112.1	SB85_11005	SB85_10330	uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJC46218.1	tsaB	SB85_11005	SB85_00460	uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycoprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
AJC46607.1	AJC45443.1	SB85_13450	SB85_06395	DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
AJC46607.1	AJC46112.1	SB85_13450	SB85_10330	DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
AJC46852.1	AJC46112.1	SB85_15035	SB85_10330	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426