Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC47619.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)    
Predicted Functional Partners:
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
    0.585
AJC46323.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
AJC46322.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.549
AJC44781.1
Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
AJC45037.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
AJC46666.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
azu
Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase.
  
     0.456
AJC44776.1
Zonular occludens toxin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.420
AJC46599.1
Methylglyoxal synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
AJC44878.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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